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diff --git a/net-mail/notmuch/notmuch-0.38.3.ebuild b/net-mail/notmuch/notmuch-0.38.3.ebuild
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+# Copyright 1999-2024 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_EXT=1
+DISTUTILS_OPTIONAL=1
+PYTHON_COMPAT=( python3_{10..13} pypy3 )
+
+inherit bash-completion-r1 desktop distutils-r1 elisp-common flag-o-matic pax-utils toolchain-funcs xdg-utils
+
+DESCRIPTION="Thread-based e-mail indexer, supporting quick search and tagging"
+HOMEPAGE="https://notmuchmail.org/"
+SRC_URI="https://notmuchmail.org/releases/${P}.tar.xz
+	test? ( https://notmuchmail.org/releases/test-databases/database-v1.tar.xz )"
+
+LICENSE="GPL-3"
+# Sub-slot corresponds to major wersion of libnotmuch.so.X.Y. Bump of Y is
+# meant to be binary backward compatible.
+SLOT="0/5"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~ppc64 ~riscv ~x86 ~x64-macos"
+REQUIRED_USE="
+	${PYTHON_REQUIRED_USE}
+	apidoc? ( doc )
+	nmbug? ( python )
+	test? ( crypt emacs python )
+"
+IUSE="apidoc crypt doc emacs mutt nmbug python test"
+RESTRICT="!test? ( test )"
+
+BDEPEND="
+	app-arch/xz-utils[extra-filters(-)]
+	virtual/pkgconfig
+	apidoc? (
+		app-text/doxygen
+		dev-lang/perl
+	)
+	doc? (
+		dev-python/sphinx[${PYTHON_USEDEP}]
+		sys-apps/texinfo
+	)
+	python? (
+		dev-python/setuptools[${PYTHON_USEDEP}]
+		test? ( dev-python/pytest[${PYTHON_USEDEP}] )
+	)
+	test? (
+		app-shells/bash
+		sys-process/parallel
+	)
+"
+
+COMMON_DEPEND="
+	dev-libs/glib
+	dev-libs/gmime:3.0[crypt?]
+	>=dev-libs/xapian-1.4.0:=
+	sys-libs/talloc
+	sys-libs/zlib:=
+	emacs? ( >=app-editors/emacs-${NEED_EMACS}:* )
+	python? (
+		${PYTHON_DEPS}
+		$(python_gen_cond_dep '
+			dev-python/cffi[${PYTHON_USEDEP}]
+		' 'python*')
+	)
+"
+
+DEPEND="${COMMON_DEPEND}
+	test? (
+		>=app-editors/emacs-${NEED_EMACS}:*[libxml2]
+		app-misc/dtach
+		dev-debug/gdb[python]
+		crypt? (
+			app-crypt/gnupg
+			dev-libs/openssl
+		)
+	)
+"
+
+RDEPEND="${COMMON_DEPEND}
+	crypt? ( app-crypt/gnupg )
+	mutt? (
+		dev-perl/File-Which
+		dev-perl/Mail-Box
+		dev-perl/MailTools
+		dev-perl/Term-ReadLine-Gnu
+		virtual/perl-Digest-SHA
+		virtual/perl-File-Path
+		virtual/perl-Getopt-Long
+		dev-perl/Pod-Parser
+	)
+	nmbug? ( dev-vcs/git )
+"
+
+SITEFILE="50${PN}-gentoo.el"
+
+PATCHES=(
+	"${FILESDIR}/notmuch-assume-modern-gmime.patch"
+)
+
+pkg_setup() {
+	use emacs && elisp-check-emacs-version
+}
+
+src_unpack() {
+	unpack "${P}".tar.xz
+	if use test; then
+		mkdir -p "${S}"/test/test-databases || die
+		cp "${DISTDIR}"/database-v1.tar.xz "${S}"/test/test-databases/ || die
+	fi
+}
+
+src_prepare() {
+	default
+
+	use python && distutils-r1_src_prepare
+
+	mv contrib/notmuch-mutt/README contrib/notmuch-mutt/README-mutt || die
+
+	# Override 'install' target, we want to install manpages with doman, but let it install texinfo files.
+	sed -i "s/all install-man install-info/all $(usex doc install-info '')/" "Makefile.local" || die
+
+	use test && append-flags '-g'
+
+	# Non-autoconf configure
+	[[ ${CHOST} == *-solaris* ]] &&	append-ldflags '-lnsl' '-lsocket'
+
+	# sphinx-4 broke everything. https://bugs.gentoo.org/789492
+	echo 'man_make_section_directory = False' >> doc/conf.py || die
+}
+
+src_configure() {
+	python_setup # For sphinx
+
+	tc-export CC CXX
+
+	local myconf=(
+		--bashcompletiondir="$(get_bashcompdir)"
+		--emacslispdir="${EPREFIX}/${SITELISP}/${PN}"
+		--emacsetcdir="${EPREFIX}/${SITEETC}/${PN}"
+		--without-desktop
+		--without-ruby
+		--zshcompletiondir="${EPREFIX}/usr/share/zsh/site-functions"
+		$(use_with apidoc api-docs)
+		$(use_with doc docs)
+		$(use_with emacs)
+	)
+
+	# FIXME:
+	# Checking for GMime session key extraction support... * ACCESS DENIED: open_wr: /dev/bus/usb/001/011
+	# notmuch configure compiles a program _check_session_keys.c, inline in ./configure script
+	# gmime/gpg/scdaemon tries to open usb devices in GMime test
+	# we pretend to allow it, without actually allowing it to read or write.
+	# https://bugs.gentoo.org/821328
+	addpredict /dev/bus/usb
+
+	econf "${myconf[@]}"
+}
+
+python_compile() {
+	pushd bindings/python-cffi > /dev/null || die
+	distutils-r1_python_compile
+	# copy stuff just in case
+	if use test; then
+		mkdir -p build/stage/tests || die
+		 cp -v tests/*.py build/stage/tests || die
+	fi
+	popd > /dev/null || die
+
+	# TODO: we want to drop those, research revdeps
+	pushd bindings/python > /dev/null || die
+	distutils-r1_python_compile
+	popd > /dev/null || die
+}
+
+python_compile_all() {
+	use doc	&& emake -C bindings/python/docs html
+}
+
+src_compile() {
+	python_setup # For sphinx
+
+	# prevent race in emacs doc generation
+	# FileNotFoundError: [Errno 2] No such file or directory: '..work/notmuch-0.31/emacs/notmuch.rsti'
+	if use emacs; then
+		use doc && emake -j1 -C emacs docstring.stamp V=1
+	fi
+
+	emake V=1
+
+	use python && distutils-r1_src_compile
+
+	if use mutt; then
+		emake -C contrib/notmuch-mutt notmuch-mutt.1
+	fi
+}
+
+python_test() {
+	# we only have tests for cffi bindings
+	pushd bindings/python-cffi > /dev/null || die
+	rm -f tox.ini || die
+	pytest -vv || die "Tests failed with ${EPYTHON}"
+	popd > /dev/null || die
+}
+
+src_test() {
+	local test_failures=()
+	pax-mark -m notmuch
+
+	# we run pytest via eclass phasefunc, so delete upstream launcher
+	use python && { rm -v test/T391-python-cffi.sh || die ; }
+
+	# These both fail because of line wrapping in the output
+	rm test/T315-emacs-tagging.sh test/T310-emacs.sh || die
+
+	LD_LIBRARY_PATH="${S}/lib" nonfatal emake test V=1 OPTIONS="--verbose --tee" || test_failures+=( "'emake tests'" )
+	pax-mark -ze notmuch
+
+	# both lib and bin needed for testsuite.
+	if use python; then
+		LD_LIBRARY_PATH="${S}/lib" \
+			PATH="${S}:${PATH}" \
+			nonfatal distutils-r1_src_test || test_failures+=( "'python tests'" )
+	fi
+
+	[[ ${test_failures} ]] && die "Tests failed: ${test_failures[@]}"
+}
+
+python_install() {
+	pushd bindings/python-cffi > /dev/null || die
+	distutils-r1_python_install
+	popd > /dev/null || die
+
+	pushd bindings/python > /dev/null || die
+	distutils-r1_python_install
+	popd > /dev/null || die
+}
+
+src_install() {
+	default
+
+	if use doc; then
+		if use apidoc; then
+			# rename overly generic manpage to avoid clashes
+			mv doc/_build/man/man3/deprecated.3 \
+				doc/_build/man/man3/notmuch-deprecated.3 || die
+		fi
+		doman doc/_build/man/man?/*.?
+	fi
+
+	if use emacs; then
+		elisp-site-file-install "${FILESDIR}/${SITEFILE}" || die
+		domenu emacs/notmuch-emacs-mua.desktop
+	fi
+
+	if use nmbug; then
+		# TODO: those guys need proper deps
+		python_fix_shebang devel/nmbug/notmuch-report
+		dobin devel/nmbug/notmuch-report
+	fi
+
+	if use mutt; then
+		pushd contrib/notmuch-mutt > /dev/null || die
+		dobin notmuch-mutt
+		# this manpage is built by pod2man
+		doman notmuch-mutt.1
+		insinto /etc/mutt
+		doins notmuch-mutt.rc
+		dodoc README-mutt
+		popd > /dev/null || die
+	fi
+
+	local DOCS=( README{,.rst} INSTALL NEWS )
+	einstalldocs
+
+	if use python; then
+		use doc && local HTML_DOCS=( bindings/python/docs/html/. )
+		distutils-r1_src_install
+	fi
+}
+
+pkg_preinst() {
+	local _rcfile="/etc/mutt/notmuch-mutt.rc"
+	if use mutt && ! [[ -e "${EROOT}"${_rcfile} ]]; then
+		elog "To enable notmuch support in mutt, add the following line"
+		elog "to your mutt config file:"
+		elog ""
+		elog "  source ${_rcfile}"
+	fi
+}
+
+pkg_postinst() {
+	if use emacs; then
+		elisp-site-regen
+		xdg_desktop_database_update
+	fi
+}
+
+pkg_postrm() {
+	if use emacs; then
+		elisp-site-regen
+		xdg_desktop_database_update
+	fi
+}